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ANOVA Results
ANOVA results will include a column for each factor in the setup (Figure 2). A column with the name of the factor or interaction followed by p-value will contain how significant the effect of the variable is on the data. A lower p-value corresponds with a more significant effect. For example, a p-value of 0.1 for tissue means that given the difference between the tissue and the inherent variability of the measurements of the genes in the functional group, there is a 10% likelihood that the tissues are equivalent. A p-value of 0 occurs when the value is too small to be displayed. This can be caused by a very low estimate of inherent variability due to either a very small number of replicates or severely unbalanced data.
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