Partek Flow Documentation

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SubtitleTextInterface of CellPhoneDB task in Partek Flow.
AnchorNamesvd_task_gui

The task report for SVD is similar to PCAIts output will be used for downstream analysis and visualization, including Harmony Double click the CellPhoneDB result data node will open the task report in Data Viewer. It is a heatmap that summarizes how many significant interactions identified in the cell type pairs (Figure 3).

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SubtitleTextExample workflows to demonstrate downstream analysis and visualization of SVD output for scATAC-seq dataCellPhoneDB task report in Data Viewer.
AnchorNamesvd_task_output

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References

  1. Cusanovich, D., Reddington, J., Garfield, D. et al. The cis-regulatory dynamics of embryonic development at single-cell resolution. Nature 555, 538–542 (2018). https://doi.org/10.1038/nature25981

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