Partek Flow Documentation

Page tree

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

Each data point is a tissue spot. Duplicate and change the sample to view multiple samples. 

Visualize the annotated image from the Annotate Visium image task

If starting with fastq files, the Annotate Visium image task will create a new result node, Annotated counts

  • Double click on the Annotated counts node to invoke the Data Viewer showing data points overlaid on top of the microscopy image 
  • Follow the steps outlined above by duplicating the image to visualize the multiple samples

Data Viewer session as a result of opening an Annotated counts data node. 

...