Flow Documentation

Partek Flow Documentation

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Old Version 17

changes.mady.by.user Simit Patel

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New Version 18

changes.mady.by.user Alex Rutkovsky

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  • Select one of the plots on the canvas
  • In the Selection card Select & Filter icon on the rightleft under Tools, set the Counts threshold to keep cells between 500 and 20000 (Figure 4)

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Numbered figure captions
SubtitleTextFiltering low quality cells based on protein expression data
AnchorNamePreviewing a filter using the Single cell QA/QC violin plots

Image RemovedImage Added

  • Click Filter include iconin the Filteringunder Filter card on the right
  • Click Apply observation filter...
  • Select the Antibody Capture data node as input in the pipeline preview (Figure 5)
  • Click Select

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Numbered figure captions
SubtitleTextFiltering low quality cells based on gene expression data
AnchorNamePreviewing a filter using the Single cell QA/QC violin plots

Image RemovedImage Added

  • Click Filter include iconin the Filtering card under Filter on the right
  • Click Apply observations filter
  • Select the Gene Expression data node as input in the pipeline preview
  • Click Select
  • Click OK to dismiss the message about the task being enqueued
  • Click the project name at the top to go back to the Analyses tab
  • Your browser may warn you that any unsaved changes to the data viewer session will be lost. Ignore this message and proceed to the Analyses tab

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