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Partek Flow supports popular gene expression microarray platforms including Affymetrix GeneChips (.CEL) and Illumina BeadChips (.idat). You can also import text output from Illumina Genome Studio in the form of tab-delimited text files with probe IDs and AVGSignal values. For the latter, each sample should correspond to one text file.  

For custom-made Affymetrix .CEL and Illumina .idat or AVGSignal data generated from Genome Studio files, refer to the Importing Custom Microarrays for additional instructions regarding the probe files.

Data Import

To import microarray files into a project, go to the Data tab of the project and select the Import Data button. If the data is not already in an existing Partek Flow project, select the Automatically create samples from files button. You will be presented with three different ways to upload your data files:

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