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Partek Flow Documentation

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Regardless of which type of classifier was applied, Partek Flow will output a new data node named Classify result (Figure 4). These outputs of cell type annotation are exactly the same as Garnett1. "cell_type" is the cell type assignments directly from Garnett model. While "cluster_ext_type" is the cell type that's determined  by expanding cell type assignments to nearby cells using Louvain clustering. Downstream analysis tasks such as normalization and PCA can be performed on the Classify result data node.

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