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Filter Groups

Because we have classified our cells, we can now filter based on those classifications. This can be used to focus on a single cell type for re-clustering and sub-classification or to exclude cells that are not of interest for downstream analysis.

• Click the Classified result data node
• Click Filtering 
• Click Filter groups
• Set to exclude Classifications is Doublets using the drop-down menus
• Click AND
• Set the second filter to exclude Classifications is N/A using the drop-down menus 
• Click Finish to apply the filter

Re-split the Matrix

Differential Analysis and Visualization - Protein Data

Differential Analysis, Visualization, and Pathway analysis - Gene Expression Data

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