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Partek Flow Documentation

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  • Set the filter to Include samples where Subtype is Oligodendroglioma 
  • Click AND
  • Set the second filter to exclude Classifications is Microglia 
  • Click Finish to apply the filter (Figure 2)

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Numbered figure captions
SubtitleTextInvoking GSA
AnchorNameInvoking GSA

The configuration options (Figure 6) includes sample and cell-level attributes. Here, we want to compare different cell types so we will include Classifications. 

  • Click Classifications
  • Click Next

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  • Uncheck Cluster samples 
  • Click Filtering and set the filter to include Classifications is Glioma
  • Choose Sample name from Choose Sample name from the Sample order order drop-down menu in the Ordering section
  • Click Finish 

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